PPDB

PPDB	The Plant Proteome Database

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AT5G25270.1 Ubiquitin-like superfamily protein

Lab Annot.

Ubiquitin-like protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G42220.1 11 Arabidopsis thaliana 3E-56 454 35 50 6 (4) _
AT5G42220.2 11 Arabidopsis thaliana 3E-56 454 35 50 0 (0) _
AT5G11080.3 11 Arabidopsis thaliana 7E-36 164 49 62 0 (0) _
Os08g19830.1 7 Oryza sativa 4E-92 714 34 50 0 (0) _
Os08g19830.3 7 Oryza sativa 8E-85 446 41 57 0 (0) _
Os07g31540.1 7 Oryza sativa 6E-22 246 34 49 13 (13) _
Zm00001eb067410_P003 agpv5 Zea mays 2E-88 707 35 49 0 (0) _
Zm00001eb067410_P001 agpv5 Zea mays 2E-88 707 35 49 0 (0) _
v1_GRMZM2G062354_P01 4a53 Zea mays 2E-88 707 35 49 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4611(2) Rad60-SLD(1) Rad60-SLD_2(1) ubiquitin(1) Ubiquitin_2(1)
TargetP:	Cytoplasm (Class 1 C0.107; M0.085; S0.077; _0.922)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	642 aa (-cTP 598)
Molecular Weight	67.41 kDA(-cTP )
PI	5.30(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data