PPDB

The Plant Proteome Database

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AT5G25265.1   Hyp O-arabinosyltransferase-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25260.1 11Arabidopsis thaliana036872810 (0)S
AT5G13500.1 11Arabidopsis thaliana9E-16932867810 (0)S
AT5G13500.2 11Arabidopsis thaliana9E-16932867810 (0)S
Os06g08180.1 7Oryza sativa1E-17436070810 (0)M
Os01g16600.1 7Oryza sativa5E-16832070830 (0)S
Os05g32060.1 7Oryza sativa5E-16035761750 (0)S
GRMZM2G072550_P01 3.21Zea mays036871810 (0)S
Zm00001eb374910_P002 agpv5Zea mays036871810 (0)S
Zm00001eb374910_P001 agpv5Zea mays036871810 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Secreted (Class 1 C0.018; M0.020; S0.945; _0.067)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 366 aa (-cTP 279)
Molecular Weight 40.97 kDA(-cTP )
PI 8.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
17432890(leaf total membranes)
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help