PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G25190.1   Integrase-type DNA-binding superfamily protein
Lab Annot.
Mapman: 17.5.2 hormone metabolism.ethylene.signal transduction
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G15360.2 11Arabidopsis thaliana2E-326380880 (0)M
AT1G15360.1 11Arabidopsis thaliana2E-326380880 (0)M
AT5G25390.2 11Arabidopsis thaliana4E-3018742550 (0)M
Os02g55380.1 7Oryza sativa9E-4717855660 (0)M
Os06g08340.1 7Oryza sativa5E-4417751630 (0)M
Os04g56150.1 7Oryza sativa7E-4116646600 (0)M
Zm00001eb192320_P001 agpv5Zea mays3E-5317454620 (0)M
v1_GRMZM2G111415_P01 4a53Zea mays3E-5317454620 (0)M
GRMZM2G111415_P01 3.21Zea mays3E-5317454620 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(1)
TargetP: Mitochondria (Class 3 C0.034; M0.790; S0.006; _0.336)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 181 aa (-cTP 169)
Molecular Weight 20.61 kDA(-cTP )
PI 7.02(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help