PPDB

The Plant Proteome Database

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AT5G25170.1   PPPDE putative thiol peptidase family protein

Lab Annot. PPPDE putative thiol peptidase; deSUMOylation/deubiquination
Mapman: 29.5.3.5.1* protein.degradation.cysteine protease.CP.C97
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25170.2 11Arabidopsis thaliana7E-12517399990 (0)_
AT2G25190.1 11Arabidopsis thaliana5E-9518272830 (0)M
AT1G80690.1 11Arabidopsis thaliana6E-8518665760 (0)M
Os03g10200.1 7Oryza sativa1E-7317959710 (0)M
Os03g01130.2 7Oryza sativa6E-6916456730 (0)C
Os03g01130.1 7Oryza sativa2E-6814959770 (0)C
Zm00001eb400970_P001 agpv5Zea mays8E-7417859720 (0)M
Zm00001eb400970_P004 agpv5Zea mays8E-7417859720 (0)M
Zm00001eb400970_P003 agpv5Zea mays8E-7417859720 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LRAT(1) Peptidase_C97(1)
TargetP: Mitochondria (Class 4 C0.009; M0.834; S0.047; _0.497)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 218 aa (-cTP 216)
Molecular Weight 24.69 kDA(-cTP )
PI 9.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help