PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G25150.1 TBP-associated factor 5

Lab Annot.

TBP-associated factor 5
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G25150.2 11 Arabidopsis thaliana 0 653 99 99 0 (0) _
AT3G49660.1 11 Arabidopsis thaliana 1E-29 214 30 51 0 (0) C
AT4G02730.1 11 Arabidopsis thaliana 3E-28 206 33 52 0 (0) _
Os06g44030.2 7 Oryza sativa 0 670 68 80 0 (0) _
Os06g44030.1 7 Oryza sativa 0 682 67 79 0 (0) _
Os07g10520.1 7 Oryza sativa 5E-103 253 62 77 0 (0) _
Zm00001eb388650_P001 agpv5 Zea mays 0 563 72 82 0 (0) _
v1_GRMZM2G135300_P02 4a53 Zea mays 0 504 72 83 0 (0) _
GRMZM2G135300_P02 3.21 Zea mays 0 504 72 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(6) Cytochrom_D1(2) eIF2A(2) FdhD-NarQ(1) Ge1_WD40(5) LisH(1) Nup160(
TargetP:	Cytoplasm (Class 3 C0.039; M0.096; S0.346; _0.852)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	669 aa (-cTP 614)
Molecular Weight	74.41 kDA(-cTP )
PI	6.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data