PPDB

The Plant Proteome Database

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AT5G25060.1   RNA recognition motif (RRM)-containing protein

Lab Annot. RNA recognition motif (RRM)-containing protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G10800.1 11Arabidopsis thaliana087977862 (0)_
AT5G10800.3 11Arabidopsis thaliana074580880 (0)_
AT5G10800.2 11Arabidopsis thaliana074674820 (0)_
Os02g08360.1 7Oryza sativa0990627510 (10)_
Os04g37690.2 6Oryza sativa2E-089033542 (2)C
Os04g37690.1 7Oryza sativa3E-089033544 (4)C
Zm00001eb234030_P001 agpv5Zea mays084867780 (0)_
v1_GRMZM2G133308_P01 4a53Zea mays0894647712 (12)S
v1_GRMZM2G174785_P02 4a53Zea mays081867779 (9)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CID(1) CTK3(1) cwf21(1) RRM_1(1) RRM_7(1) Surp(1)
TargetP: Cytoplasm (Class 3 C0.077; M0.314; S0.036; _0.791)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 946 aa (-cTP 920)
Molecular Weight 108.28 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
20813957(SUMO proteome)

Comparative Proteomics Data


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