PPDB

The Plant Proteome Database

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AT5G25040.1   Major facilitator superfamily protein

Lab Annot. transporter
Mapman: 34.99 transport.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25040.4 11Arabidopsis thaliana049292920 (0)_
AT5G25040.2 11Arabidopsis thaliana051788881 (1)_
AT5G25040.3 11Arabidopsis thaliana03781001001 (1)_
Os04g42130.1 7Oryza sativa2E-14443149670 (0)_
Os06g08750.1 7Oryza sativa1E-13739952700 (0)_
Os09g25560.1 7Oryza sativa2E-11540644640 (0)_
Zm00001eb374450_P001 agpv5Zea mays2E-13946148650 (0)_
Zm00001eb374450_P004 agpv5Zea mays2E-13946148650 (0)_
v1_GRMZM2G157102_P01 4a53Zea mays4E-12637552680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BT1(3) MFS_1(3) MFS_3(1)
TargetP: Cytoplasm (Class 1 C0.123; M0.056; S0.080; _0.940)
Predotar:
Subcel. Location:
TM-HMM prediction: 9 TMs
Aramemnon: 10 TMs
TAT position:
Length 457 aa (-cTP 430)
Molecular Weight 51.29 kDA(-cTP )
PI 8.41(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1666Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

21826108(SYP trans-Golgi-filtered)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help