PPDB

PPDB	The Plant Proteome Database

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AT5G24870.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G24870.3 11 Arabidopsis thaliana 0 520 100 100 0 (0) _
AT5G24870.2 11 Arabidopsis thaliana 0 520 100 100 0 (0) _
AT5G10650.1 11 Arabidopsis thaliana 0 532 57 70 0 (0) _
Os06g48040.1 7 Oryza sativa 9E-79 356 46 58 0 (0) _
Os02g05692.1 7 Oryza sativa 2E-63 159 62 77 0 (0) M
Os04g51400.3 7 Oryza sativa 2E-37 165 44 58 0 (0) _
Zm00001eb232400_P003 agpv5 Zea mays 3E-63 541 35 47 0 (0) C
Zm00001eb232400_P001 agpv5 Zea mays 3E-63 541 35 47 0 (0) C
v1_GRMZM2G392320_P01 4a53 Zea mays 3E-63 541 35 47 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) zf-ANAPC11(1) zf-C3H2C3(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_
TargetP:	Cytoplasm (Class 2 C0.099; M0.167; S0.001; _0.799)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	520 aa (-cTP 496)
Molecular Weight	56.79 kDA(-cTP )
PI	9.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data