PPDB

PPDB	The Plant Proteome Database

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AT5G24830.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G63080.1 11 Arabidopsis thaliana 2E-66 441 30 50 0 (0) M
AT1G63080.3 11 Arabidopsis thaliana 2E-66 441 30 50 0 (0) M
AT1G63080.2 11 Arabidopsis thaliana 2E-66 441 30 50 0 (0) M
Os03g06910.1 7 Oryza sativa 3E-69 438 30 52 0 (0) M
Os06g05920.1 7 Oryza sativa 2E-65 415 31 52 0 (0) C
Os08g31110.1 7 Oryza sativa 2E-63 444 28 49 0 (0) M
Zm00001eb190860_P001 agpv5 Zea mays 2E-63 438 33 50 0 (0) M
Zm00001eb007770_P004 agpv5 Zea mays 3E-63 417 31 50 0 (0) _
Zm00001eb007770_P001 agpv5 Zea mays 3E-63 417 31 50 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	MRP-S27(5) NatB_MDM20(1) PPR(12) PPR_1(12) PPR_2(11) PPR_3(8) PPR_long(4) TPR_12
TargetP:	Chloroplast (Class 5 C0.400; M0.113; S0.253; _0.178)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	593 aa (-cTP 565)
Molecular Weight	66.54 kDA(-cTP 63.43)
PI	8.33(-cTP 8.44)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data