PPDB

The Plant Proteome Database

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AT5G24740.1   vacuolar protein sorting-associated protein%2C putative (DUF1162)

Lab Annot. unknown function (DUF1162)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24740.5 11Arabidopsis thaliana0346699990 (0)M
AT5G24740.2 11Arabidopsis thaliana0350498980 (0)M
AT5G24740.3 11Arabidopsis thaliana0354197970 (0)M
Os08g02350.1 7Oryza sativa0184141600 (0)C
Os08g02354.1 7Oryza sativa2E-11849643610 (0)_
Os02g27130.1 7Oryza sativa5E-2334927470 (0)_
v1_GRMZM2G033348_P02 4a53Zea mays066648660 (0)S
Zm00001eb260890_P003 agpv5Zea mays0293534530 (0)M
Zm00001eb260890_P002 agpv5Zea mays0293534530 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Chorein_N(1) SHR-BD(5) VPS13(1) VPS13_C(2) VPS13_mid_rpt(2)
TargetP: Mitochondria (Class 5 C0.063; M0.290; S0.221; _0.272)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 3464 aa (-cTP 3462)
Molecular Weight 386.45 kDA(-cTP )
PI 5.97(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(trichomes)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data


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