PPDB

PPDB	The Plant Proteome Database

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AT5G24740.1 vacuolar protein sorting-associated protein%2C putative (DUF1162)

Lab Annot.

unknown function (DUF1162)
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G24740.5 11 Arabidopsis thaliana 0 3466 99 99 0 (0) M
AT5G24740.2 11 Arabidopsis thaliana 0 3504 98 98 0 (0) M
AT5G24740.3 11 Arabidopsis thaliana 0 3541 97 97 0 (0) M
Os08g02350.1 7 Oryza sativa 0 1841 41 60 0 (0) C
Os08g02354.1 7 Oryza sativa 2E-118 496 43 61 0 (0) _
Os02g27130.1 7 Oryza sativa 5E-23 349 27 47 0 (0) _
v1_GRMZM2G033348_P02 4a53 Zea mays 0 666 48 66 0 (0) S
Zm00001eb260890_P003 agpv5 Zea mays 0 2935 34 53 0 (0) M
Zm00001eb260890_P002 agpv5 Zea mays 0 2935 34 53 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Chorein_N(1) SHR-BD(5) VPS13(1) VPS13_C(2) VPS13_mid_rpt(2)
TargetP:	Mitochondria (Class 5 C0.063; M0.290; S0.221; _0.272)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	3464 aa (-cTP 3462)
Molecular Weight	386.45 kDA(-cTP )
PI	5.97(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(trichomes)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data