PPDB

The Plant Proteome Database

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AT5G24520.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide binding
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24520.3 11Arabidopsis thaliana03411001003 (1)_
AT5G24520.2 11Arabidopsis thaliana03411001003 (1)_
AT5G24520.4 11Arabidopsis thaliana03411001000 (0)_
Os02g45810.2 7Oryza sativa4E-14934761740 (0)_
Os02g45810.1 7Oryza sativa4E-14934761740 (0)_
Os02g32430.1 7Oryza sativa3E-12738651640 (0)_
Zm00001eb250740_P001 agpv5Zea mays5E-15233963780 (0)_
Zm00001eb250740_P002 agpv5Zea mays5E-15233963780 (0)_
v1_GRMZM2G058292_P01 4a53Zea mays5E-15233963780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(4) WD40(4)
TargetP: Cytoplasm (Class 2 C0.108; M0.135; S0.042; _0.829)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 341 aa (-cTP 316)
Molecular Weight 37.89 kDA(-cTP )
PI 4.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2290Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help