PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G24510.1   60S acidic ribosomal protein family
Lab Annot.
Mapman: 29.2.1.2.2.81 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G01100.3 11Arabidopsis thaliana2E-24112486271 (70)S
AT4G00810.2 11Arabidopsis thaliana2E-231165165102 (89)S
AT4G00810.1 11Arabidopsis thaliana2E-231165165102 (89)S
Os08g02340.2 7Oryza sativa2E-2664678539 (39)_
Os08g02340.1 7Oryza sativa2E-2664678539 (39)_
GRMZM2G032315_P01 3.21Zea mays2E-27646887116 (113)_
Zm00001eb260880_P002 agpv5Zea mays2E-276468870 (0)_
Zm00001eb260880_P001 agpv5Zea mays2E-276468870 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_60s(1)
TargetP: Cytoplasm (Class 4 C0.148; M0.064; S0.330; _0.576)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 111 aa (-cTP 32)
Molecular Weight 11.98 kDA(-cTP )
PI 4.41(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help