PPDB

The Plant Proteome Database

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AT5G24450.1   Transcription factor IIIC%2C subunit 5

Lab Annot. Transcription factor IIIC, subunit 5
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24450.2 11Arabidopsis thaliana04961001000 (0)_
AT3G49410.1 11Arabidopsis thaliana055974840 (0)_
AT3G49410.3 11Arabidopsis thaliana055974840 (0)_
Os01g34430.1 7Oryza sativa1E-8140537540 (0)_
Os01g34420.1 7Oryza sativa1E-2313440550 (0)C
GRMZM2G053008_P03 3.21Zea mays1E-12656938540 (0)_
Zm00001eb420200_P002 agpv5Zea mays1E-12656938540 (0)_
GRMZM2G053008_P02 3.21Zea mays2E-12656738550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BUD22(1) Tau95(2) Tau95_N(2)
TargetP: Cytoplasm (Class 2 C0.195; M0.136; S0.034; _0.800)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 554 aa (-cTP 507)
Molecular Weight 63.64 kDA(-cTP )
PI 4.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help