PPDB

The Plant Proteome Database

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AT5G24440.1   CTC-interacting domain 13

Lab Annot. RNA-binding protein, putative. Contains PAM2, PABC binding domain.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G49390.1 11Arabidopsis thaliana9E-12734956690 (0)_
AT3G49390.3 11Arabidopsis thaliana9E-12734956690 (0)_
AT3G49390.2 11Arabidopsis thaliana9E-12734956690 (0)_
Os08g02330.1 7Oryza sativa3E-10327154710 (0)_
Os01g11120.1 7Oryza sativa8E-8920463771 (1)_
Os02g14760.1 7Oryza sativa3E-8318267800 (0)_
Zm00001eb260870_P005 agpv5Zea mays1E-10028254680 (0)_
Zm00001eb260870_P007 agpv5Zea mays1E-10028254680 (0)_
GRMZM2G173428_P01 3.21Zea mays2E-10028254683 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PAM2(1) RRM_1(2) RRM_occluded(2)
TargetP: Cytoplasm (Class 4 C0.453; M0.026; S0.059; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 320 aa (-cTP 251)
Molecular Weight 36.09 kDA(-cTP )
PI 8.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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