PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G24280.1   gamma-irradiation and mitomycin c induced 1

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24280.3 11Arabidopsis thaliana0159897970 (0)_
AT5G24280.2 11Arabidopsis thaliana0159897970 (0)_
AT5G24275.1 11Arabidopsis thaliana053865780 (0)_
Os01g13404.1 7Oryza sativa9E-4434633500 (0)_
Os01g13404.3 7Oryza sativa2E-4328736520 (0)_
Os01g13404.2 7Oryza sativa3E-4329935510 (0)_
v1_GRMZM2G309152_P02 4a53Zea mays2E-4333034510 (0)_
v1_GRMZM2G309152_P01 4a53Zea mays2E-4333034510 (0)_
GRMZM2G309152_P02 3.21Zea mays2E-4333034510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Crescentin(2) HATPase_c(1) HATPase_c_3(2)
TargetP: Cytoplasm (Class 2 C0.042; M0.222; S0.107; _0.836)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 1598 aa (-cTP 1594)
Molecular Weight 179.12 kDA(-cTP )
PI 6.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1750Detail        [A. thaliana] Col-0
1751Detail        [A. thaliana] Col-0

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help