PPDB

PPDB	The Plant Proteome Database

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AT5G24260.1 prolyl oligopeptidase family protein

Lab Annot.

X-Pro dipeptidyl peptidase (DPP1)(S9 Evalue 0; S15 E-value 0.0037)
Mapman: 29.5.5.5.4* protein.degradation.serine protease.SC.S9

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G24260.2 11 Arabidopsis thaliana 0 746 100 100 0 (0) _
AT5G24260.4 11 Arabidopsis thaliana 0 746 100 100 0 (0) _
AT5G24260.3 11 Arabidopsis thaliana 0 746 100 100 0 (0) _
Os02g18850.1 7 Oryza sativa 0 600 63 80 0 (0) _
Os06g11180.1 7 Oryza sativa 2E-09 261 24 42 3 (3) C
Os10g28030.1 7 Oryza sativa 2E-07 216 22 42 0 (0) _
v1_GRMZM2G174572_P01 4a53 Zea mays 0 745 62 76 7 (7) _
Zm00001eb237090_P001 agpv5 Zea mays 0 745 62 76 0 (0) _
GRMZM2G174572_P01 3.21 Zea mays 0 745 62 76 5 (5) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Abhydrolase_1(1) Abhydrolase_2(2) Abhydrolase_3(1) Abhydrolase_6(1) BAAT_C(1) DL
TargetP:	Cytoplasm (Class 1 C0.083; M0.100; S0.079; _0.914)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	746 aa (-cTP 695)
Molecular Weight	83.85 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1471	Detail								leaf [A. thaliana]	co-IP GST-ClpS stroma	clps (rep. 1-2)
1480	Detail								leaf [A. thaliana]	co-IP GST-ClpSmut stroma	clpc1 x clps (rep. 6)
1526	Detail								leaf [A. thaliana]	co-IP GST-ClpS 100ug bait stroma	clpc1 x clps (rep. 2)
2225	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 trap

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data