PPDB

The Plant Proteome Database

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AT5G24165.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G24165.2 11Arabidopsis thaliana2E-48751001000 (0)C
AT4G23885.1 11Arabidopsis thaliana3E-157549680 (0)M
GRMZM2G056078_P01 3.21Zea mays2E-1594445711 (11)C
Zm00001eb277870_P004 agpv5Zea mays5E-139343520 (0)M
Zm00001eb383200_P001 agpv5Zea mays2E-129042560 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: S36_mt(1)
TargetP: Chloroplast (Class 5 C0.768; M0.577; S0.015; _0.048)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 75 aa (-cTP 41)
Molecular Weight 7.76 kDA(-cTP 4.14)
PI 10.38(-cTP 6.28)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1351Detail       leaf [A. thaliana] total tissue t1-t2
1352Detail       leaf [A. thaliana] total tissue Prep1_Prep2
1353Detail       leaf [A. thaliana] total tissue Prep1_Prep2_t1
1420Detail        [A. thaliana]  
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  

* For details about the exprimental sources click here.

Published Proteomics Data

21311031(mitochondria)
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data


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