PPDB

The Plant Proteome Database

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AT5G24090.1   chitinase A

Lab Annot. acidic endochitinase (CHIB1)
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os07g19040.1 7Oryza sativa2E-13629661750 (0)S
Os01g64110.1 7Oryza sativa1E-12427562760 (0)S
Os01g47070.1 7Oryza sativa3E-12027557760 (0)S
Zm00001eb305270_P001 agpv5Zea mays1E-13528962770 (0)S
GRMZM2G130686_P01 3.21Zea mays7E-13528961770 (0)S
v1_GRMZM2G130686_P01 4a53Zea mays7E-13528961770 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_18(1)
TargetP: Secreted (Class 2 C0.004; M0.068; S0.827; _0.078)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 302 aa (-cTP 254)
Molecular Weight 33.10 kDA(-cTP )
PI 9.17(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help