PPDB

 The Plant Proteome Database

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AT5G23940.1   HXXXD-type acyl-transferase family protein
Lab Annot. unknown protein - EMB3009 (EMBRYO DEFECTIVE 3009)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G39980.1 11Arabidopsis thaliana2E-6549431490 (0)_
AT5G42830.1 11Arabidopsis thaliana7E-6544433521 (1)_
AT5G67150.1 11Arabidopsis thaliana2E-64459325010 (3)_
Os08g44840.1 7Oryza sativa8E-143429516721 (21)_
Os08g02020.1 7Oryza sativa3E-5746031460 (0)_
Os01g63480.1 7Oryza sativa8E-5747132470 (0)S
v1_GRMZM2G179703_P01 4a53Zea mays5E-152436526529 (29)_
GRMZM2G179703_P02 3.21Zea mays5E-152436526530 (30)_
Zm00001eb038890_P001 agpv5Zea mays5E-15243652650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Transferase(1)
TargetP: Cytoplasm (Class 3 C0.019; M0.328; S0.160; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 484 aa (-cTP 480)
Molecular Weight 53.51 kDA(-cTP )
PI 5.31(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19200160(flower-stage 12)

Comparative Proteomics Data

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