PPDB

The Plant Proteome Database

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AT5G23830.1   MD-2-related lipid recognition domain-containing protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23830.2 11Arabidopsis thaliana2E-10316497970 (0)S
AT5G23820.1 11Arabidopsis thaliana6E-751657283124 (103)S
AT5G23840.1 11Arabidopsis thaliana7E-7515976860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: E1_DerP2_DerF2(1)
TargetP: Secreted (Class 1 C0.003; M0.016; S0.995; _0.045)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 164 aa (-cTP 140)
Molecular Weight 18.09 kDA(-cTP )
PI 4.40(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data


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