PPDB

 The Plant Proteome Database

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AT5G23760.1   Copper transport protein family
Lab Annot. heavy-metal-associated domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23760.2 11Arabidopsis thaliana7E-54921001000 (0)_
AT1G01490.2 11Arabidopsis thaliana2E-147052742 (1)_
AT1G01490.1 11Arabidopsis thaliana2E-147052742 (1)_
Os10g36200.1 7Oryza sativa4E-317375900 (0)S
Os10g36200.2 7Oryza sativa7E-317375900 (0)_
Os03g02070.2 7Oryza sativa1E-308476900 (0)_
GRMZM2G056431_P02 3.21Zea mays4E-307373912 (2)_
v1_GRMZM2G056431_P02 4a53Zea mays4E-307373911 (1)_
Zm00001eb044060_P001 agpv5Zea mays4E-307373910 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cytomega_UL84(1) DUF809(1) HMA(1) Peroxin-13_N(1) RICTOR_N(1) Syja_N(1) Topoisom
TargetP: Cytoplasm (Class 4 C0.043; M0.072; S0.485; _0.754)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 103 aa (-cTP 68)
Molecular Weight 11.57 kDA(-cTP )
PI 8.61(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help