PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G23450.1 long-chain base (LCB) kinase 1

Lab Annot.

long-chain base (LCB) kinase 1
Mapman: 11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G23450.2 11 Arabidopsis thaliana 0 763 100 100 0 (0) C
AT5G23450.5 11 Arabidopsis thaliana 0 763 100 100 0 (0) C
AT5G23450.3 11 Arabidopsis thaliana 0 778 98 98 0 (0) C
Os04g45800.1 7 Oryza sativa 0 733 57 71 0 (0) C
Os10g37280.1 7 Oryza sativa 0 736 57 71 0 (0) C
Os08g05650.1 7 Oryza sativa 6E-78 193 61 79 2 (2) C
Zm00001eb427640_P003 agpv5 Zea mays 0 725 59 72 0 (0) C
Zm00001eb427640_P002 agpv5 Zea mays 0 725 59 72 0 (0) C
Zm00001eb043540_P003 agpv5 Zea mays 0 738 57 72 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DAGK_cat(1)
TargetP:	Chloroplast (Class 4 C0.608; M0.370; S0.030; _0.023)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	763 aa (-cTP 709)
Molecular Weight	83.59 kDA(-cTP 77.68)
PI	8.65(-cTP 7.35)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data