PPDB

PPDB	The Plant Proteome Database

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AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1

Lab Annot.

ferredoxin-thioredoxin reductase -variable subunit (subunit A) (FTRv2)
Mapman: 21.1 redox.thioredoxin

Curated Location

plastid stroma (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G08410.1 11 Arabidopsis thaliana 9E-69 183 59 75 180 (127) C
AT5G08410.2 11 Arabidopsis thaliana 1E-68 183 59 75 0 (0) C
Os02g42570.1 7 Oryza sativa 2E-33 81 62 82 16 (16) C
Os04g44650.1 7 Oryza sativa 2E-32 179 37 58 0 (0) C
v1_GRMZM2G139803_P01 4a53 Zea mays 3E-32 80 61 82 84 (84) C
Zm00001eb248360_P001 agpv5 Zea mays 3E-32 80 61 82 8 (8) C
GRMZM2G139803_P01 3.21 Zea mays 3E-32 80 61 82 90 (82) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FeThRed_A(1)
TargetP:	Chloroplast (Class 1 C0.949; M0.061; S0.003; _0.027)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	182 aa (-cTP 101)
Molecular Weight	19.82 kDA(-cTP 11.42)
PI	8.75(-cTP 5.45)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
180_181	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1
187_188	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1
272	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1
326	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type
873	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1455	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1456	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1457	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1458	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 1)
1459	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 2)
1460	Detail								leaf [A. thaliana]	chloroplast stroma	clps (rep. 3)
1461	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 1)
1462	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 2)
1463	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 (rep. 3)
1481	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 1)
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1941	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1943	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1944	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1945	Detail								leaf [A. thaliana]	stroma UVR stroma	UVR
1946	Detail								leaf [A. thaliana]	stroma UVR stroma	wild-type
1947	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1948	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1949	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1999	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2001	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2069	Detail								Total leaf [A. thaliana]	total soluble	wt & prep1xprep2xclpt1xclpt2*
2073	Detail								Total leaf [A. thaliana]	total soluble	wt & prep1xprep2xclpt1xclpt2*
2113	Detail								leaf [A. thaliana]	Stroma stroma	wt
2115	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2141	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2142	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2143	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2144	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2145	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2149	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2151	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19995723(chloroplast reference proteome)
21173025(root proteome)

Comparative Proteomics Data