PPDB

PPDB	The Plant Proteome Database

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AT5G23405.1 HMG-box (high mobility group) DNA-binding family protein

Lab Annot.

Mapman: 27.3.62 RNA.regulation of transcription.Nucleosome/chromatin assembly factor group

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G23405.2 11 Arabidopsis thaliana 7E-106 149 99 99 0 (0) _
AT5G23405.3 11 Arabidopsis thaliana 7E-106 149 99 99 0 (0) _
AT5G23420.1 11 Arabidopsis thaliana 8E-22 141 42 56 2 (1) C
Os08g01100.1 7 Oryza sativa 2E-09 127 31 48 0 (0) M
Zm00001eb198700_P001 agpv5 Zea mays 1E-12 133 37 50 0 (0) M
Zm00001eb198700_P004 agpv5 Zea mays 4E-08 189 31 43 0 (0) M
v1_GRMZM2G125648_P01 4a53 Zea mays 4E-08 189 31 43 1 (1) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	HMG_box(1) HMG_box_2(1) NOA36(1) RNA_pol_3_Rpc31(1) TFIIA(1)
TargetP:	Cytoplasm (Class 3 C0.319; M0.118; S0.063; _0.806)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	149 aa (-cTP 67)
Molecular Weight	17.01 kDA(-cTP )
PI	4.60(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data