PPDB

PPDB	The Plant Proteome Database

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AT5G23400.1 Leucine-rich repeat (LRR) family protein

Lab Annot.

Mapman: 20.1.7 stress.biotic.PR-proteins

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G26380.1 11 Arabidopsis thaliana 2E-79 466 35 55 0 (0) S
AT1G33600.1 11 Arabidopsis thaliana 6E-77 457 36 55 128 (50) S
AT1G33600.2 11 Arabidopsis thaliana 6E-77 457 36 55 0 (0) S
Os04g58080.1 7 Oryza sativa 1E-99 562 37 52 0 (0) S
Os03g21730.1 7 Oryza sativa 2E-67 570 32 50 0 (0) S
Os11g41100.1 7 Oryza sativa 3E-64 576 33 48 0 (0) S
GRMZM2G008583_P01 3.21 Zea mays 5E-98 471 38 56 0 (0) M
Zm00001eb433730_P001 agpv5 Zea mays 5E-98 471 38 56 0 (0) M
v1_GRMZM2G008583_P01 4a53 Zea mays 5E-98 471 38 56 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LRR_1(15) LRR_4(11) LRR_6(14) LRR_8(10) LRRNT_2(1)
TargetP:	Secreted (Class 2 C0.003; M0.161; S0.953; _0.006)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	589 aa (-cTP 558)
Molecular Weight	64.02 kDA(-cTP )
PI	9.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
15593128(Cell Wall proteome)
19714877(interactomes 14-3-3 complexes (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data