PPDB

PPDB	The Plant Proteome Database

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AT5G23390.1 polygalacturonase inhibitor (DUF639)

Lab Annot.

Plant protein of unknown function (DUF639)
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48840.1 11 Arabidopsis thaliana 0 725 43 60 1 (1) _
AT3G18350.1 11 Arabidopsis thaliana 4E-174 713 41 59 0 (0) _
AT3G18350.3 11 Arabidopsis thaliana 4E-174 713 41 59 0 (0) _
Os02g42530.1 7 Oryza sativa 0 685 47 68 0 (0) M
Os04g58100.1 7 Oryza sativa 0 696 45 63 0 (0) _
Os02g42530.2 7 Oryza sativa 0 608 47 67 0 (0) _
GRMZM2G008622_P02 3.21 Zea mays 0 708 44 63 0 (0) _
Zm00001eb433740_P002 agpv5 Zea mays 0 708 44 63 0 (0) _
v1_GRMZM2G008622_P02 4a53 Zea mays 0 708 44 63 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Chromate_transp(1) DUF639(1) Pex24p(1) PRT_C(2) Reticulon(1) TctB(2)
TargetP:	Cytoplasm (Class 3 C0.303; M0.036; S0.012; _0.840)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	730 aa (-cTP 670)
Molecular Weight	81.78 kDA(-cTP )
PI	8.57(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)
19546170(mature pollen grains)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data