PPDB

The Plant Proteome Database

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AT5G23300.1   pyrimidine d

Lab Annot. dihydropyrimidine dehydrogenase (DHODH)
Mapman: 23.1.1.4 nucleotide metabolism.synthesis.pyrimidine.dihydroorotate dehydrogenase
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g57950.1 7Oryza sativa041082911 (1)M
GRMZM2G043776_P01 3.21Zea mays0418818913 (13)M
Zm00001eb433680_P001 agpv5Zea mays041881890 (0)M
v1_GRMZM2G043776_P01 4a53Zea mays0418818913 (13)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DHO_dh(1) FMN_dh(4)
TargetP: Mitochondria (Class 4 C0.474; M0.681; S0.011; _0.008)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 460 aa (-cTP 423)
Molecular Weight 48.55 kDA(-cTP )
PI 9.29(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1548Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1556Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1617Detail        [A. thaliana] m48
2245Detail       seedlings [A. thaliana] total tissue wild-type
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2269Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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