PPDB

The Plant Proteome Database

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AT5G23220.1   nicotinamidase 3

Lab Annot.
Mapman: 16.2 secondary metabolism.phenylpropanoids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23230.1 11Arabidopsis thaliana5E-12919886920 (0)_
AT3G16190.1 11Arabidopsis thaliana7E-09185274211 (8)_
Os04g44420.1 7Oryza sativa7E-5315254710 (0)M
Os02g17620.1 7Oryza sativa2E-0618226410 (0)_
v1_GRMZM2G362413_P01 4a53Zea mays3E-7119353713 (3)_
Zm00001eb076800_P001 agpv5Zea mays3E-7119353710 (0)_
GRMZM2G362413_P01 3.21Zea mays3E-7119353712 (2)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1287(1) Isochorismatase(1)
TargetP: Chloroplast (Class 5 C0.436; M0.330; S0.011; _0.405)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 198 aa (-cTP 195)
Molecular Weight 22.23 kDA(-cTP 21.94)
PI 5.97(-cTP 5.96)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help