PPDB

The Plant Proteome Database

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AT5G23210.2   serine carboxypeptidase-like 34

Lab Annot. SCPL34; serine carboxypeptidase
Mapman: 29.5.5.5.1* protein.degradation.serine protease.SC.S10
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23210.5 11Arabidopsis thaliana03961001000 (0)_
AT5G23210.1 11Arabidopsis thaliana039610010062 (30)S
AT5G23210.4 11Arabidopsis thaliana035510010039 (18)_
Os02g42310.1 7Oryza sativa0396637531 (31)S
Os02g42310.2 7Oryza sativa0396637531 (31)_
Os02g42310.3 7Oryza sativa9E-170356637531 (31)_
v1_GRMZM2G161696_P01 4a53Zea mays0398627512 (12)S
Zm00001eb185470_P001 agpv5Zea mays039862750 (0)S
Zm00001eb185470_P002 agpv5Zea mays039862750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_S10(1)
TargetP: Cytoplasm (Class 3 C0.146; M0.143; S0.146; _0.616)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 403 aa (-cTP 401)
Molecular Weight 45.73 kDA(-cTP )
PI 8.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2247Detail       seedlings [A. thaliana] total tissue atg5
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17526915(glycoproteome cell wall (stems))
19200160(flower-stage 12)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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