PPDB

The Plant Proteome Database

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AT5G23130.1   Peptidoglycan-binding LysM domain-containing protein

Lab Annot. peptidoglycan-binding LysM domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G08200.1 11Arabidopsis thaliana2E-15841864750 (0)_
Os10g34420.1 7Oryza sativa5E-6534844570 (0)_
Os03g01990.1 7Oryza sativa2E-4735935480 (0)_
Os06g51360.1 7Oryza sativa6E-3833834520 (0)_
Zm00001eb221300_P001 agpv5Zea mays8E-6333440550 (0)_
v1_GRMZM2G048559_P01 4a53Zea mays8E-6333440550 (0)_
GRMZM2G048559_P01 3.21Zea mays8E-6333440550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LysM(1)
TargetP: Mitochondria (Class 5 C0.520; M0.703; S0.001; _0.078)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 397 aa (-cTP 331)
Molecular Weight 43.21 kDA(-cTP )
PI 9.73(-cTP )

Experimental Evidence

Expand

 

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help