PPDB

The Plant Proteome Database

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AT5G23090.3   nuclear factor Y%2C subunit B13

Lab Annot.
Mapman: 27.3.13 RNA.regulation of transcription.CCAAT box binding factor family, DR1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23090.1 11Arabidopsis thaliana3E-10415991910 (0)_
AT5G23090.2 11Arabidopsis thaliana3E-10415991910 (0)_
AT5G23090.5 11Arabidopsis thaliana3E-10415991910 (0)_
Os08g29500.1 7Oryza sativa1E-6415167791 (1)_
Os08g29500.2 7Oryza sativa8E-6116163741 (1)_
Os01g61810.3 6Oryza sativa2E-149239650 (0)_
Zm00001eb178500_P001 agpv5Zea mays6E-6515168790 (0)_
v1_GRMZM2G147712_P01 4a53Zea mays6E-6515168792 (2)_
GRMZM2G147712_P01 3.21Zea mays6E-6515168790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CBFD_NFYB_HMF(1) CENP-W(1)
TargetP: Cytoplasm (Class 1 C0.040; M0.108; S0.129; _0.933)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 146 aa (-cTP 125)
Molecular Weight 16.49 kDA(-cTP )
PI 4.64(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help