PPDB

 The Plant Proteome Database

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AT5G23040.1   cell growth defect factor-like protein (DUF3353)
Lab Annot. CHAPERONE-LIKE PROTEIN OF POR1 (CPP1) (CDF1)
Mapman: 19.4 tetrapyrrole synthesis.regulation
Curated Location envelope (Pubmed: 23198870 18431481 12775770 25901327 ) (supported by in-house exprements)
mitochondria (Pubmed: 23198870 18431481 12775770 25901327 ) (supported by in-house exprements)

TAIR curated location: mitochondrion16192270
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G23040.2 11Arabidopsis thaliana02581001000 (0)C
AT3G51140.1 11Arabidopsis thaliana2E-392033761104 (103)C
AT3G51140.2 11Arabidopsis thaliana3E-2914240620 (0)C
Os09g21250.1 7Oryza sativa9E-99202678214 (14)M
Os08g32130.1 7Oryza sativa3E-9520664790 (0)M
Os08g32130.2 7Oryza sativa3E-9520664790 (0)M
Zm00001eb311660_P003 agpv5Zea mays2E-9620267810 (0)M
GRMZM2G010389_P01 3.21Zea mays2E-96202678134 (34)M
v1_GRMZM2G010389_P01 4a53Zea mays2E-96202678128 (28)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CPP1-like(1) Na_Ca_ex(1)
TargetP: Chloroplast (Class 1 C0.971; M0.080; S0.043; _0.037)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 258 aa (-cTP 211)
Molecular Weight 28.82 kDA(-cTP 23.82)
PI 9.68(-cTP 9.10)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
326Detail       leaf [A. thaliana] chloroplast stromawild-type
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 12938931(Total chloroplast envelope)
18431481(chloroplast)
19995728(proplastid (Brassica napus))
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data

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