PPDB

PPDB	The Plant Proteome Database

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AT5G22950.1 SNF7 family protein

Lab Annot.

VPS24.1
Mapman: 27.3.71 RNA.regulation of transcription.SNF7

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G45000.1 11 Arabidopsis thaliana 3E-95 199 75 87 0 (0) _
AT3G45000.2 11 Arabidopsis thaliana 4E-62 139 76 87 0 (0) _
AT1G03950.1 11 Arabidopsis thaliana 8E-24 224 28 53 0 (0) _
Os07g29630.1 7 Oryza sativa 4E-106 233 74 89 0 (0) _
Os03g01810.1 7 Oryza sativa 2E-104 231 72 87 0 (0) _
Os10g33660.1 7 Oryza sativa 7E-21 225 28 51 0 (0) _
Zm00001eb000670_P002 agpv5 Zea mays 3E-106 229 72 85 0 (0) _
GRMZM2G042552_P03 3.21 Zea mays 3E-106 229 72 85 0 (0) _
v1_GRMZM2G042552_P03 4a53 Zea mays 3E-106 229 72 85 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1955(2) DUF826(1) Dynein_heavy(2) HTH_11(1) HTH_26(1) HTH_6(1) MbeB_N(2) NAD_
TargetP:	Cytoplasm (Class 2 C0.062; M0.168; S0.024; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	229 aa (-cTP 164)
Molecular Weight	26.00 kDA(-cTP )
PI	5.58(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data