PPDB

The Plant Proteome Database

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AT5G22870.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G08160.1 11Arabidopsis thaliana4E-3418039621 (1)_
AT3G11660.1 11Arabidopsis thaliana6E-2016727531 (1)M
AT2G27080.2 11Arabidopsis thaliana7E-2018426500 (0)_
Os02g44670.1 7Oryza sativa2E-2316131510 (0)M
Os02g33550.1 7Oryza sativa3E-17154275127 (27)_
Os04g58850.1 7Oryza sativa4E-17173274728 (28)S
Zm00001eb022900_P001 agpv5Zea mays9E-3218934550 (0)M
v1_GRMZM2G175952_P01 4a53Zea mays7E-1916026511 (1)M
Zm00001eb106290_P001 agpv5Zea mays7E-1916026510 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Act-Frag_cataly(2) LEA_2(1) Vac7(1)
TargetP: Cytoplasm (Class 3 C0.041; M0.290; S0.098; _0.829)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 207 aa (-cTP 146)
Molecular Weight 23.61 kDA(-cTP )
PI 9.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help