PPDB

PPDB	The Plant Proteome Database

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AT5G22770.3 alpha-adaptin

Lab Annot.

ALPHA-ADR (ALPHA-ADAPTIN); binding / protein binding / protein transporter
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G22770.1 11 Arabidopsis thaliana 0 1012 100 100 126 (23) _
AT5G22770.2 11 Arabidopsis thaliana 0 1012 100 100 126 (23) _
AT5G22770.6 11 Arabidopsis thaliana 0 1012 100 100 0 (0) _
Os03g02150.1 7 Oryza sativa 0 994 75 86 36 (36) _
Os03g02150.2 7 Oryza sativa 0 918 75 86 36 (36) _
Os06g07090.1 7 Oryza sativa 1E-85 733 29 50 34 (34) _
Zm00001eb404080_P003 agpv5 Zea mays 0 798 75 85 0 (0) _
GRMZM2G700148_P01 3.21 Zea mays 0 430 89 96 17 (8) _
Zm00001eb404080_P002 agpv5 Zea mays 0 1049 73 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adaptin_N(1) Alpha_adaptin_C(1) Alpha_adaptinC2(1) Cnd1(2) Dopey_N(1) HEAT(2) Pr
TargetP:	Cytoplasm (Class 3 C0.092; M0.218; S0.150; _0.627)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1012 aa (-cTP 986)
Molecular Weight	112.15 kDA(-cTP )
PI	5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2298	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2304	Detail								[A. thaliana]		Clp C1 WT
2305	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17432890(leaf total membranes)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19888209(leaves)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data