PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G22620.1   phosphoglycerate/bisphosphoglycerate mutase family protein
Lab Annot. phosphoglycerate/bisphosphoglycerate mutase (PGAM)
Mapman: 4.11 glycolysis.phosphoglycerate mutase
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22620.5 11Arabidopsis thaliana04821001000 (0)C
AT5G22620.2 11Arabidopsis thaliana048210010088 (43)C
AT5G22620.6 11Arabidopsis thaliana048298980 (0)C
Os11g05260.1 7Oryza sativa043863760 (0)C
Os01g13570.1 7Oryza sativa1E-5420343652 (2)C
Os01g13570.2 7Oryza sativa5E-5118045672 (2)C
Zm00001eb196880_P001 agpv5Zea mays044462750 (0)C
v1_GRMZM2G051697_P01 4a53Zea mays044462754 (4)C
GRMZM2G051697_P01 3.21Zea mays0444627510 (9)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: His_Phos_1(2)
TargetP: Chloroplast (Class 3 C0.903; M0.348; S0.009; _0.018)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 482 aa (-cTP 430)
Molecular Weight 53.11 kDA(-cTP 47.08)
PI 6.65(-cTP 5.63)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1465Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 1)
1467Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 2)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1870Detail       Total leaf [A. thaliana] Stroma wild-type
1871Detail       Total leaf [A. thaliana] Stroma wild-type
1872Detail       Total leaf [A. thaliana] Stroma wild-type
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
2032Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2034Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2038Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2059Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2061Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2063Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2064Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2065Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2068Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2069Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2072Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2079Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2082Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2113Detail       leaf [A. thaliana] Stroma stromawt
2114Detail       leaf [A. thaliana] Stroma stromawt
2115Detail       leaf [A. thaliana] Stroma stromacGep
2116Detail       leaf [A. thaliana] Stroma stromacGep
2142Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2144Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

 20423899(chloroplast)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help