PPDB

The Plant Proteome Database

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AT5G22610.1   F-box/RNI-like/FBD-like domains-containing protein

Lab Annot. F-box/RNI-like/FBD-like domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22610.2 11Arabidopsis thaliana050294940 (0)_
AT5G22600.1 11Arabidopsis thaliana4E-12533561700 (0)M
AT5G22600.2 11Arabidopsis thaliana4E-12533561700 (0)M
Os04g35990.1 7Oryza sativa7E-1537326420 (0)M
Os02g29150.2 7Oryza sativa3E-1125327420 (0)_
Os02g29150.1 7Oryza sativa5E-1125327420 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) FBD(2) LRR_2(3)
TargetP: Cytoplasm (Class 4 C0.085; M0.094; S0.228; _0.621)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 472 aa (-cTP 460)
Molecular Weight 53.86 kDA(-cTP )
PI 5.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1535Detail       leaf [A. thaliana] wild-type
1595Detail        [A. thaliana]  
1744Detail        [A. thaliana] Mep-6

* For details about the exprimental sources click here.

Published Proteomics Data

19106119(plasma membrane detergent resistent microdomains (DRM))
22010978(Endosomal-sorting-interactome-VPS2.2)

Comparative Proteomics Data


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