PPDB

The Plant Proteome Database

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AT5G22550.1   transmembrane protein%2C putative (DUF247)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22550.2 11Arabidopsis thaliana049290900 (0)_
AT5G22560.1 11Arabidopsis thaliana3E-17752352630 (0)_
AT5G22540.1 11Arabidopsis thaliana5E-14045648610 (0)_
Os04g42650.1 7Oryza sativa2E-4347527450 (0)_
Os01g21710.1 7Oryza sativa5E-3944325420 (0)M
Os12g29650.1 7Oryza sativa5E-3247623400 (0)_
Zm00001eb197750_P001 agpv5Zea mays3E-4245425430 (0)_
v1_GRMZM2G067943_P01 4a53Zea mays3E-4245425430 (0)_
GRMZM2G067943_P01 3.21Zea mays3E-4245425430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF247(2)
TargetP: Cytoplasm (Class 2 C0.263; M0.074; S0.077; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 3 TMs
TAT position:
Length 443 aa (-cTP 438)
Molecular Weight 50.60 kDA(-cTP )
PI 8.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help