PPDB

The Plant Proteome Database

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AT5G22540.1   transmembrane protein%2C putative (DUF247)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G22550.2 11Arabidopsis thaliana4E-17445654680 (0)_
AT3G44710.1 11Arabidopsis thaliana2E-16348550650 (0)_
AT5G22560.1 11Arabidopsis thaliana9E-15549647620 (0)_
Os04g42650.1 7Oryza sativa9E-6148231470 (0)_
Os01g21710.1 7Oryza sativa6E-5841929500 (0)M
Os12g29650.1 7Oryza sativa1E-5643230510 (0)_
Zm00001eb197750_P001 agpv5Zea mays3E-6345131520 (0)_
v1_GRMZM2G067943_P01 4a53Zea mays3E-6345131520 (0)_
GRMZM2G067943_P01 3.21Zea mays3E-6345131520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF247(1)
TargetP: Cytoplasm (Class 2 C0.129; M0.097; S0.139; _0.815)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 2 TMs
TAT position:
Length 440 aa (-cTP 360)
Molecular Weight 50.43 kDA(-cTP )
PI 6.22(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help