PPDB

 The Plant Proteome Database

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AT5G22470.1   poly ADP-ribose polymerase 3
Lab Annot. NAD+ ADP-ribosyltransferases
Mapman: 29.4 protein.postranslational modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G31320.1 11Arabidopsis thaliana3E-10375631500 (0)C
AT4G02390.3 11Arabidopsis thaliana1E-3849624450 (0)_
AT4G02390.1 11Arabidopsis thaliana3E-3849624450 (0)_
Os02g32860.1 7Oryza sativa083056730 (0)_
Os07g23110.1 7Oryza sativa2E-10276430510 (0)C
Os01g24940.1 7Oryza sativa3E-3748225440 (0)M
Zm00001eb242720_P002 agpv5Zea mays083256720 (0)_
Zm00001eb242720_P001 agpv5Zea mays083256720 (0)_
v1_GRMZM2G038536_P01 4a53Zea mays083256720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BRCT(2) BRCT_2(1) BRCT_3(1) Glyco_trans_1_4(1) Mvb12(1) PADR1(1) PARP(1) PARP_re
TargetP: Cytoplasm (Class 2 C0.164; M0.113; S0.057; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 815 aa (-cTP 808)
Molecular Weight 91.53 kDA(-cTP )
PI 5.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to seeds)
19200160(flower-stage 12)
19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help