PPDB

PPDB	The Plant Proteome Database

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AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

ATTIP49A/RIN1
Mapman: 20.1 stress.biotic

Curated Location

TAIR curated location: nucleus15469496

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49830.1 11 Arabidopsis thaliana 4E-120 459 42 64 0 (0) _
AT5G67630.1 11 Arabidopsis thaliana 2E-118 459 43 66 38 (5) _
Os01g62040.1 7 Oryza sativa 0 455 86 93 2 (2) _
Os07g08170.1 7 Oryza sativa 0 455 86 93 2 (2) _
Os01g62040.2 7 Oryza sativa 0 339 89 94 2 (2) _
GRMZM2G032267_P01 3.21 Zea mays 0 456 85 93 72 (16) _
Zm00001eb208840_P002 agpv5 Zea mays 0 461 83 92 0 (0) _
GRMZM2G018697_P01 3.21 Zea mays 0 461 83 92 69 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_11(1) AAA_14(2) AAA_16(2) AAA_18(1) AAA_19(1) AAA_22(2) AAA_25(1) AAA
TargetP:	Cytoplasm (Class 1 C0.043; M0.120; S0.029; _0.934)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	458 aa (-cTP 371)
Molecular Weight	50.32 kDA(-cTP )
PI	5.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1507	Detail								[A. thaliana]		wild-type
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2289	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
15496452(nucleolus)
11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data