PPDB

PPDB	The Plant Proteome Database

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AT5G21960.1 Integrase-type DNA-binding superfamily protein

Lab Annot.

DREB subA-5 of ERF/AP2 transcription factor
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G19210.1 11 Arabidopsis thaliana 1E-41 213 42 55 0 (0) _
AT1G74930.1 11 Arabidopsis thaliana 5E-37 109 61 72 0 (0) _
AT4G31060.1 11 Arabidopsis thaliana 1E-26 92 53 70 0 (0) C
Os02g54050.1 7 Oryza sativa 1E-29 93 62 69 0 (0) _
Os06g09717.1 7 Oryza sativa 5E-26 87 58 70 0 (0) M
Os06g09760.1 7 Oryza sativa 1E-25 85 60 71 0 (0) _
Zm00001eb257030_P001 agpv5 Zea mays 3E-30 83 66 78 0 (0) _
Zm00001eb193060_P001 agpv5 Zea mays 1E-28 86 63 76 0 (0) C
v1_GRMZM2G097081_P01 4a53 Zea mays 1E-28 86 63 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AP2(1)
TargetP:	Cytoplasm (Class 3 C0.032; M0.324; S0.020; _0.822)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	216 aa (-cTP 193)
Molecular Weight	24.40 kDA(-cTP )
PI	4.64(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)

Comparative Proteomics Data