PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G21900.1 RNI-like superfamily protein

Lab Annot.

RNI-like protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G21900.2 11 Arabidopsis thaliana 0 435 98 98 0 (0) _
AT2G06040.1 11 Arabidopsis thaliana 1E-92 394 43 58 0 (0) C
AT3G58530.1 11 Arabidopsis thaliana 8E-15 210 31 51 0 (0) _
Os08g35700.1 7 Oryza sativa 4E-69 385 38 55 0 (0) C
Os02g17990.4 7 Oryza sativa 5E-15 205 31 48 0 (0) _
Os02g17990.2 7 Oryza sativa 1E-14 205 31 48 0 (0) _
v1_GRMZM2G178924_P02 4a53 Zea mays 7E-69 395 39 57 0 (0) M
GRMZM2G178924_P02 3.21 Zea mays 7E-69 395 39 57 0 (0) M
Zm00001eb177300_P001 agpv5 Zea mays 1E-68 382 39 57 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2576(2) LRR_4(4) LRR_6(5) LRR_8(3) Ragweed_pollen(2)
TargetP:	Cytoplasm (Class 3 C0.218; M0.183; S0.073; _0.800)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	544 aa (-cTP 516)
Molecular Weight	61.94 kDA(-cTP )
PI	5.77(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data