PPDB

The Plant Proteome Database

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AT5G21060.1   Glyceraldehyde-3-phosphate dehydrogenase-like family protein

Lab Annot. Glyceraldehyde-3-phosphate dehydrogenase-like
Mapman: 13.1.3.6.1.3 amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine dehydrogenase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G21060.2 11Arabidopsis thaliana0378999915 (3)M
AT5G21060.3 11Arabidopsis thaliana0378999915 (3)M
AT1G31230.1 11Arabidopsis thaliana2E-482663659445 (338)C
Os11g03470.3 7Oryza sativa4E-175373657910 (10)M
Os12g03190.1 7Oryza sativa3E-174373657910 (10)M
Os11g03470.2 7Oryza sativa8E-172383637710 (10)M
GRMZM2G151977_P01 3.21Zea mays5E-174373657947 (7)M
Zm00001eb405410_P002 agpv5Zea mays5E-17437365790 (0)M
v1_GRMZM2G151977_P01 4a53Zea mays5E-17437365796 (6)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Homoserine_dh(1) NAD_binding_3(1)
TargetP: Mitochondria (Class 4 C0.023; M0.580; S0.029; _0.310)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 376 aa (-cTP 347)
Molecular Weight 40.41 kDA(-cTP )
PI 6.28(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2248Detail       seedlings [A. thaliana] total tissue wild-type
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help