PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G21050.1   hyccin

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64090.1 11Arabidopsis thaliana3E-6831343580 (0)C
Os03g51210.1 7Oryza sativa2E-7431242610 (0)_
Os11g06860.1 7Oryza sativa4E-4631238558 (8)C
Zm00001eb055600_P001 agpv5Zea mays1E-7228246650 (0)_
Zm00001eb122600_P003 agpv5Zea mays7E-4831338540 (0)C
Zm00001eb122600_P001 agpv5Zea mays7E-4831338540 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Hyccin(1) UPF0147(1)
TargetP: Chloroplast (Class 4 C0.816; M0.011; S0.067; _0.612)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 355 aa (-cTP 331)
Molecular Weight 38.90 kDA(-cTP 36.53)
PI 5.27(-cTP 5.62)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help