PPDB

The Plant Proteome Database

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AT5G20885.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G43430.1 11Arabidopsis thaliana3E-7617569800 (0)S
AT3G61460.1 11Arabidopsis thaliana1E-1515729470 (0)S
AT5G41400.1 11Arabidopsis thaliana7E-1510933480 (0)S
Os04g49000.1 7Oryza sativa6E-189940530 (0)S
Os02g45710.1 7Oryza sativa2E-169441540 (0)S
Os03g22080.1 7Oryza sativa8E-1312035450 (0)_
GRMZM2G397684_P01 3.21Zea mays9E-1810438500 (0)S
v1_GRMZM2G397684_P01 4a53Zea mays9E-1810438500 (0)S
Zm00001eb428450_P001 agpv5Zea mays9E-1810438500 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auto_anti-p27(2) Baculo_RING(1) DUF1644(2) FANCL_C(1) PHD(1) Prok-RING_1(3) Prok
TargetP: Secreted (Class 4 C0.043; M0.020; S0.407; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 176 aa (-cTP 122)
Molecular Weight 19.94 kDA(-cTP )
PI 4.81(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help