PPDB

PPDB	The Plant Proteome Database

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AT5G20885.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G43430.1 11 Arabidopsis thaliana 3E-76 175 69 80 0 (0) S
AT3G61460.1 11 Arabidopsis thaliana 1E-15 157 29 47 0 (0) S
AT5G41400.1 11 Arabidopsis thaliana 7E-15 109 33 48 0 (0) S
Os04g49000.1 7 Oryza sativa 6E-18 99 40 53 0 (0) S
Os02g45710.1 7 Oryza sativa 2E-16 94 41 54 0 (0) S
Os03g22080.1 7 Oryza sativa 8E-13 120 35 45 0 (0) _
GRMZM2G397684_P01 3.21 Zea mays 9E-18 104 38 50 0 (0) S
v1_GRMZM2G397684_P01 4a53 Zea mays 9E-18 104 38 50 0 (0) S
Zm00001eb428450_P001 agpv5 Zea mays 9E-18 104 38 50 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Auto_anti-p27(2) Baculo_RING(1) DUF1644(2) FANCL_C(1) PHD(1) Prok-RING_1(3) Prok
TargetP:	Secreted (Class 4 C0.043; M0.020; S0.407; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	176 aa (-cTP 122)
Molecular Weight	19.94 kDA(-cTP )
PI	4.81(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data