PPDB

The Plant Proteome Database

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AT5G20670.1   DUF1677 family protein (DUF1677)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72510.1 11Arabidopsis thaliana3E-2913644610 (0)_
AT1G72510.2 11Arabidopsis thaliana3E-2913644610 (0)_
AT2G09970.1 11Arabidopsis thaliana7E-2313839590 (0)_
Os06g09900.1 7Oryza sativa1E-209645600 (0)_
Os03g46300.1 7Oryza sativa5E-1910343540 (0)_
Os05g44410.1 7Oryza sativa3E-176752650 (0)M
v1_GRMZM2G135501_P01 4a53Zea mays4E-259150640 (0)_
GRMZM2G135501_P01 3.21Zea mays4E-259150640 (0)_
Zm00001eb373920_P001 agpv5Zea mays4E-259150640 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1677(1) PHD(1)
TargetP: Chloroplast (Class 5 C0.680; M0.025; S0.117; _0.557)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 153 aa (-cTP 107)
Molecular Weight 16.69 kDA(-cTP 11.96)
PI 8.22(-cTP 9.30)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help