PPDB

PPDB	The Plant Proteome Database

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AT5G20660.1 Zn-dependent exopeptidases superfamily protein

Lab Annot.

Zn-dependent exopeptidase (M20)
Mapman: 29.5.7.7.3* protein.degradation.metalloprotease.MH.M28

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G20660.3 11 Arabidopsis thaliana 0 707 100 100 0 (0) _
AT5G20660.2 11 Arabidopsis thaliana 0 301 98 98 0 (0) _
AT5G20660.4 11 Arabidopsis thaliana 0 269 100 100 0 (0) S
Os04g43916.1 7 Oryza sativa 0 871 54 71 1 (1) _
Os04g43916.2 7 Oryza sativa 0 871 54 71 1 (1) _
Os07g19530.1 7 Oryza sativa 2E-42 336 33 50 2 (2) M
Zm00001eb378830_P005 agpv5 Zea mays 0 726 55 72 0 (0) _
Zm00001eb378830_P002 agpv5 Zea mays 0 715 54 72 0 (0) _
Zm00001eb378830_P004 agpv5 Zea mays 0 566 51 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF2254(1) Peptidase_M20(1) Peptidase_M28(1) Peptidase_M42(1)
TargetP:	Cytoplasm (Class 2 C0.113; M0.089; S0.060; _0.868)
Predotar:
Subcel. Location:
TM-HMM prediction:	9 TMs
Aramemnon:	9 TMs
TAT position:
Length	910 aa (-cTP 888)
Molecular Weight	100.09 kDA(-cTP )
PI	6.66(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data