PPDB

 The Plant Proteome Database

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AT5G20390.1   Glycosyl hydrolase superfamily protein
Lab Annot.
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20340.1 11Arabidopsis thaliana034973820 (0)S
AT5G20330.1 11Arabidopsis thaliana034075830 (0)S
AT1G33220.1 11Arabidopsis thaliana3E-17834272790 (0)S
Os01g58730.1 7Oryza sativa5E-9431844650 (0)S
Os05g41610.1 7Oryza sativa9E-9033443620 (0)S
Os01g71400.1 7Oryza sativa1E-7233941590 (0)S
GRMZM2G591605_P02 3.21Zea mays2E-9031743630 (0)S
Zm00001eb369410_P001 agpv5Zea mays2E-9031743630 (0)S
GRMZM2G088951_P01 3.21Zea mays2E-8733641610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_17(1) UDPG_MGDP_dh_N(1)
TargetP: Secreted (Class 1 C0.001; M0.066; S0.985; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 344 aa (-cTP 246)
Molecular Weight 37.96 kDA(-cTP )
PI 4.96(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help