PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G20300.1   Avirulence induced gene (AIG1) family protein

Lab Annot. Avirulence induced gene (AIG1) protein
Mapman: 29.3.3 protein.targeting.chloroplast
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G20300.4 11Arabidopsis thaliana07931001000 (0)_
AT5G20300.5 11Arabidopsis thaliana07931001000 (0)_
AT5G20300.2 11Arabidopsis thaliana07931001000 (0)_
Os12g09570.2 7Oryza sativa080644630 (0)M
Os10g40110.1 7Oryza sativa4E-17371140593 (3)_
Os05g05950.1 7Oryza sativa5E-149707395658 (58)_
v1_GRMZM2G100579_P02 4a53Zea mays078344633 (3)M
Zm00001eb264300_P005 agpv5Zea mays070046670 (0)_
Zm00001eb264300_P003 agpv5Zea mays070046670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(1) AAA_16(1) AIG1(1) DUF87(1) Dynamin_N(2) FeoB_N(1) MMR_HSR1(1) RsgA_GTPase
TargetP: Cytoplasm (Class 4 C0.116; M0.113; S0.074; _0.386)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 793 aa (-cTP 781)
Molecular Weight 89.33 kDA(-cTP )
PI 8.22(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help